Difference between revisions of "Topmodel"

Revision as of 18:28, 2 August 2008

Introduction

The TOPMODEL package contains an implementation of the venerable TOPMODEL, along with some other useful functions. Although the package has been tested extensively, it may be contain bugs. All feedback is welcome (see the feedback page).

Thanks go to Keith Beven, who wrote the original TOPMODEL in Fortran, and Huidae Cho, for the C code base (originally implemented in GRASS GIS)

For a fully documented example, see the Running Topmodel page.

Downloads

Installation

Windows

Local packages can be installed from the menu. Choose "install package(s) from local zip files" and select the downloaded topmodel_0.3.zip file.

Linux

Use the normal procedure of installing a package in R:

  > R CMD install topmodel_0.3.tar.gz

Developer tools, including gcc, must be installed.

Mac

Go to the Package Installer (Packages and Data menu), select "Local Binary Package", click install and select the downloaded package

Loading

Once in R you need to load the package before you can use it:

  > library(topmodel)

Function overview

Full documentation is provided in the package, and can be opened with:

  > help.start()

@@ Line 8: / Line 8: @@
 Thanks go to [http://www.lec.lancs.ac.uk/cswm/Staff_kb.php Keith Beven], who wrote the original TOPMODEL in Fortran, and [http://geni.ath.cx/ Huidae Cho], for the C code base (originally implemented in [http://grass.osgeo.org/ GRASS GIS])
-For a fully documented example, see the [[running topmodel]] page.
+For a fully documented example, see the [[Running Topmodel]] page.
 ==Downloads==